Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836705.1_cds_XP_016506412.1_19639
CDS Infomation

[gene=LOC107824182] [db_xref=GeneID:107824182] [protein=glutamyl-tRNA reductase 1, chloroplastic-like] [protein_id=XP_016506412.1] [location=join(2021..2315,2666..2907,3363..4502)] [gbkey=CDS]
Sequence

ATGGCGGTAGCGAGTGGCTTTGCGACCTCTTTTGCAGTTGACAGTTTTCGTTGTGATAAT
TTAAGTTCTACGTCGTGTTCTTCGTCTTTTTCTCCTTCCGTGGATTGTTTCCGGCACCAA
GTTAGTTTATTCGGGAAAGGTCGGAGAATTAAGCCGTTGGTTTATTGGACGAAATCGCAT
TCTTTGAGCCCTAGATGTGAAGTTGCTTCGAACTCGGTGGTTAGTAATGGTGAAAAGGAA
TCTAAAGCGTCGAGTCTTTCAGCTTTGGAGCTTCTGAAAACATCTGCGGCTGACAGATAT
ACAAAGAGTAGCAGCAGCATCATGGTGATTGGACTTAACATTCACACAGCACCAGTTGAA
GTGCGGGAGAAAGTCTCCATTCCAGAAGCACAGTGGCCTCAAGCAATTCGTGAACTATGT
TCCTTGAATCATATAGAGGAAGCTGCTGTATTGAGTACTTGTAACAGAATCGAAATATAT
GTTGTGGCGCTGGCCCAAAATCGTGGAATTAAAGAAGTGACTGAGTGGATGTCTAAGTTT
AGTGGAGTTCCAGTGACAGAGCTTTGCCAACACCGATTTTTGCTATACAATCAAGATGCC
ACACAACACCTGTTTGAAGTAGCTGCTGGGCTGGATTCCCTAGTCCTAGGAGAAGGACAA
ATTCTTGCACAGGTCAAGCAGGTTGTTAAGAATGGACAGGGGGTCCCTGGCTTTGGTAGG
AAAATAAGTGAGCTATTTAAGCATGCAATCACAGCCGGAAAGAGGGTTAGGACTGAGACC
AATATTTCCAGCGGATCAGTATCAGTAAGTTCAGCTGCAGTGGAGCTTGCTTTGCTGAAA
CTTCCGGAGTATTCTTCTTCTACTGCCCGCGTGTTAGTAGTTGGAGCAGGGAAGATGGGA
AAGCTTGTGATCAAACATTTGGTTGCTAAAGGGTGTAAAAAGATGGTTGTAGTTAACAGG
ACCGAGGACAGAGTTGCTGCCATCCGTGAGGAGTTGAAGGATGCTGAAATAATATACAAA
CCTCTCTCAGAAATGTTATCATGTGCTGCTCAGGCTGATGTAGTATTCACCTGCACTGCT
TCAGAAGCTCCTTTATATGTAAAGGAGAGTGTTCAAGCACTTCCTGCTGTGAACTCTGAA
TTTGGGGGACAGAGGCTATTTATCGATATTTCTGTTCCTCGGAATGTGGAGCCTTGTGTC
TCAGAACTCAAAGGTGCATGTGTTTACAATGTGGACAATCTTAAAGAGGTTGTGGAAGCT
AATAAGGAGGATCGGTTGCGGAAGAAAATGGAAGCTCAGGCCATCATTGATGAGGAAGTG
AAACAATTTGAAGCCCGTAAAGACTCCCTTGAGACGGTTCCAACTATCAAAAAGCTCAGG
GCATATGCTGAAAGAATTAGGGCTGCTGAGGTTGACAAGTGTTTGTCCAAGATGGGTGAT
GACCTCCCCAAAAACAAGAAGAAAGCTATCTATGATCTCAGTCTAGGGATAGTGAACAAG
CTGCTACACGGACCAATGCAGCATCTGAAATGTGATGGAGCTGAAAATCGAACTTTAAGT
GAGATACTTGAAAATATGCATGCCCTTAACAGAATATTTGGTCTTGATACAGAGATTTCT
GTATTGGAAGAGAAGTTACGAGCCAAGATAGAACAAAATCAAAAGCAATCTTCTTGA

Peptide Sequence

PEP ID

XP_016506412.1
PEP Infomation

PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVASGFATSFAVDSFRCDNLSSTSCSSSFSPSVDCFRHQVSLFGKGRRIKPLVYWTKSH
SLSPRCEVASNSVVSNGEKESKASSLSALELLKTSAADRYTKSSSSIMVIGLNIHTAPVE
VREKVSIPEAQWPQAIRELCSLNHIEEAAVLSTCNRIEIYVVALAQNRGIKEVTEWMSKF
SGVPVTELCQHRFLLYNQDATQHLFEVAAGLDSLVLGEGQILAQVKQVVKNGQGVPGFGR
KISELFKHAITAGKRVRTETNISSGSVSVSSAAVELALLKLPEYSSSTARVLVVGAGKMG
KLVIKHLVAKGCKKMVVVNRTEDRVAAIREELKDAEIIYKPLSEMLSCAAQADVVFTCTA
SEAPLYVKESVQALPAVNSEFGGQRLFIDISVPRNVEPCVSELKGACVYNVDNLKEVVEA
NKEDRLRKKMEAQAIIDEEVKQFEARKDSLETVPTIKKLRAYAERIRAAEVDKCLSKMGD
DLPKNKKKAIYDLSLGIVNKLLHGPMQHLKCDGAENRTLSEILENMHALNRIFGLDTEIS
VLEEKLRAKIEQNQKQSS

Transcript Sequence

Gene sequence data has not been registered.